# solve.com -- take 1 mad dataset and solve it # version that reads ccp4 mtz data file # setenv CCP4_OPEN UNKNOWN solve <<EOD logfile solve.logfile ! write out most information to this file. resolution 20 3.0 ! you need resolution. Cell params read ! from the mtz file. ! get the data from ccp4 file mad_fbar-cad.mtz: ! NOTE: do not put in FP=FP SIGFP=SIGFP because SOLVE will assume it is MIR! ! Also you can EITHER use labin/hklin OR readccp4_unmerged but not both. labin FPH1=FPH1 SIGFPH1=SIGFPH1 DPH1=DPH1 SIGDPH1=SIGDPH1 labin FPH2=FPH2 SIGFPH2=SIGFPH2 DPH2=DPH2 SIGDPH2=SIGDPH2 labin FPH3=FPH3 SIGFPH3=SIGFPH3 DPH3=DPH3 SIGDPH3=SIGDPH3 hklin mad_fbar-cad.mtz ! scaled data is all ready mad_atom se lambda 1 label set 1 with 2 se atoms, lambda 1 wavelength .9782 ! wavelength value fprimv_mad -10 ! f' value at this wavelength fprprv_mad 3 ! f doubleprime value ATOMNAME Se ! we're about to enter data on an atom lambda 2 wavelength 0.977865 fprimv_mad -7.5 fprprv_mad 5 lambda 3 wavelength 0.8856 fprimv_mad -2 fprprv_mad 3.5 nres 80 nanomalous 2 ! analyze_mad solve !--------all done---------- EOD